Archive for the ‘Science’ Category

22 Panels challenge, Science/Faith flowchart

February 19th, 2007 by Reinder

Peter Venables' 22 panels challenge. Peter has re-worked Wallace Wood's famous 22 pictures that always work in his own style. I'll take this challenge some day, but not now.

Wellington Grey explains how science and faith work in nifty flow charts. His website and journal are also great, except that for some reason he wants to stop people posting cat pictures on the internet, which tells me there's something not quite right about him. He'll be calling for a ban on internet porn next (via Boing Boing).

Wellington Grey's going to hate this: 1700+ pictures of cats found on the internet (via Pete Ashton, who asks "what more do you need? " Er, another 1700 pictures of cats?)

[Adam Cuerden] If you will kindly read a bit further….

September 5th, 2006 by Adam Cuerden

One popular "problem with evolution" that Creationists and Intelligent Design Advocates love to bring up is the problem of the evolution of the eye. For instance,

"To suppose that the eye, with all its inimitable contrivances for adjusting the focus to different distances, for admitting different amounts of light, and for the correction of spherical and chromatic aberration, could have been formed by natural selection, seems, I freely confess, absurd in the highest possible degree."

...Oh, drat. I seem to have accidentally quoted the introduction to DARWIN'S EXPLANATION OF HOW IT COULD EVOLVE instead of a creationist tract. So, let's see what Darwin has to say:


"Yet reason tells me, that if numerous gradations from a perfect and complex eye to one very imperfect and simple, each grade being useful to its possessor, can be shown to exist; if further, the eye does vary ever so slightly, and the variations be inherited, which is certainly the case; and if any variation or modification in the organ be ever useful to an animal under changing conditions of life, then the difficulty of believing that a perfect and complex eye could be formed by natural selection, though insuperable by our imagination, can hardly be considered real. How a nerve comes to be sensitive to light, hardly concerns us more than how life itself first originated; but I may remark that several facts make me suspect that any sensitive nerve may be rendered sensitive to light, and likewise to those coarser vibrations of the air which produce sound.

In looking for the gradations by which an organ in any species has been perfected, we ought to look exclusively to its lineal ancestors; but this is scarcely ever possible, and we are forced in each case to look to species of the same group, that is to the collateral descendants from the same original parent-form, in order to see what gradations are possible, and for the chance of some gradations having been transmitted from the earlier stages of descent, in an unaltered or little altered condition. Amongst existing Vertebrata, we find but a small amount of gradation in the structure of the eye, and from fossil species we can learn nothing on this head. In this great class we should probably have to descend far beneath the lowest known fossiliferous stratum to discover the earlier stages, by which the eye has been perfected.

In the Articulata we can commence a series with an optic nerve merely coated with pigment, and without any other mechanism; and from this low stage, numerous gradations of structure, branching off in two fundamentally different lines, can be shown to exist, until we reach a moderately high stage of perfection. In certain crustaceans, for instance, there is a double cornea, the inner one divided into facets, within each of which there is a lens shaped swelling. In other crustaceans the transparent cones which are coated by pigment, and which properly act only by excluding lateral pencils of light, are convex at their upper ends and must act by convergence; and at their lower ends there seems to be an imperfect vitreous substance. With these facts, here far too briefly and imperfectly given, which show that there is much graduated diversity in the eyes of living crustaceans, and bearing in mind how small the number of living animals is in proportion to those which have become extinct, I can see no very great difficulty (not more than in the case of many other structures) in believing that natural selection has converted the simple apparatus of an optic nerve merely coated with pigment and invested by transparent membrane, into an optical instrument as perfect as is possessed by any member of the great Articulate class.

He who will go thus far, if he find on finishing this treatise that large bodies of facts, otherwise inexplicable, can be explained by the theory of descent, ought not to hesitate to go further, and to admit that a structure even as perfect as the eye of an eagle might be formed by natural selection, although in this case he does not know any of the transitional grades. His reason ought to conquer his imagination; though I have felt the difficulty far too keenly to be surprised at any degree of hesitation in extending the principle of natural selection to such startling lengths."


-Origin of Species, Chapter 6

Alright, yes, he skims over the explanation. He could have done a better job going through the path from light-detecting spot - light detecting spot in a low pit to allow directionality, pit closes off into sphere, providing pinhole camera focus, development of rudimentary lens, etc. But the explanation is there. And, since they are choosing an example Darwin himself brought up as a seeming difficulty in his theory that isn't, it becomes clear that whoever in Creation Science popularised that difficulty HAD READ DARWIN, and thus KNEW HE HAD AN EXPLANATION FOR IT, but decided they didn't care, and so brought it up.

What makes it all the more infuriating is that even people who should know better say that Darwin was unable to explain it. Take this review of Dawkins' latest book:

Review of Climbing Mount Improbable, by Valerous Geist. "Charles Darwin admitted he was stumped to explain its evolution. However, what Darwin couldn't do, Mr. Dawkins can. Chapter 5 explains, step by step, the evolution eyes. It is a masterpiece. Like much of this book, this chapter was screened by colleagues who had the expertise to insure accuracy, and whose help Mr. Dawkins properly acknowledges."

Darwin was quite able to do it. He didn't, perhaps, do it well, and Dawkins in all likelihood explains it better. But HE DID IT.

Hell, Darwin even deals with how some organs can change function, going through a transitory form in which both functions are done by the same organ, before the new one dominates. Which explains away many of the other Creationist supposed evidences against evolution:

We should be extremely cautious in concluding that an organ could not have been formed by transitional gradations of some kind. Numerous cases could be given amongst the lower animals of the same organ performing at the same time wholly distinct functions; thus the alimentary canal respires, digests, and excretes in the larva of the dragon-fly and in the fish Cobites. In the Hydra, the animal may be turned inside out, and the exterior surface will then digest and the stomach respire. In such cases natural selection might easily specialise, if any advantage were thus gained, a part or organ, which had performed two functions, for one function alone, and thus wholly change its nature by insensible steps. Two distinct organs sometimes perform simultaneously the same function in the same individual; to give one instance, there are fish with gills or branchiae that breathe the air dissolved in the water, at the same time that they breathe free air in their swimbladders, this latter organ having a ductus pneumaticus for its supply, and being divided by highly vascular partitions. In these cases, one of the two organs might with ease be modified and perfected so as to perform all the work by itself, being aided during the process of modification by the other organ; and then this other organ might be modified for some other and quite distinct purpose, or be quite obliterated.

The illustration of the swimbladder in fishes is a good one, because it shows us clearly the highly important fact that an organ originally constructed for one purpose, namely flotation, may be converted into one for a wholly different purpose, namely respiration. The swimbladder has, also, been worked in as an accessory to the auditory organs of certain fish, or, for I do not know which view is now generally held, a part of the auditory apparatus has been worked in as a complement to the swimbladder. All physiologists admit that the swimbladder is homologous, or 'ideally similar,' in position and structure with the lungs of the higher vertebrate animals: hence there seems to me to be no great difficulty in believing that natural selection has actually converted a swimbladder into a lung, or organ used exclusively for respiration.

I can, indeed, hardly doubt that all vertebrate animals having true lungs have descended by ordinary generation from an ancient prototype, of which we know nothing, furnished with a floating apparatus or swimbladder. We can thus, as I infer from Professor Owen's interesting description of these parts, understand the strange fact that every particle of food and drink which we swallow has to pass over the orifice of the trachea, with some risk of falling into the lungs, notwithstanding the beautiful contrivance by which the glottis is closed. In the higher Vertebrata the branchiae have wholly disappeared the slits on the sides of the neck and the loop-like course of the arteries still marking in the embryo their former position. But it is conceivable that the now utterly lost branchiae might have been gradually worked in by natural selection for some quite distinct purpose: in the same manner as, on the view entertained by some naturalists that the branchiae and dorsal scales of Annelids are homologous with the wings and wing-covers of insects, it is probable that organs which at a very ancient period served for respiration have been actually converted into organs of flight.

In considering transitions of organs, it is so important to bear in mind the probability of conversion from one function to another, that I will give one more instance. Pedunculated cirripedes have two minute folds of skin, called by me the ovigerous frena, which serve, through the means of a sticky secretion, to retain the eggs until they are hatched within the sack. These cirripedes have no branchiae, the whole surface of the body and sack, including the small frena, serving for respiration. The Balanidae or sessile cirripedes, on the other hand, have no ovigerous frena, the eggs lying loose at the bottom of the sack, in the well-enclosed shell; but they have large folded branchiae. Now I think no one will dispute that the ovigerous frena in the one family are strictly homologous with the branchiae of the other family; indeed, they graduate into each other. Therefore I do not doubt that little folds of skin, which originally served as ovigerous frena, but which, likewise, very slightly aided the act of respiration, have been gradually converted by natural selection into branchiae, simply through an increase in their size and the obliteration of their adhesive glands. If all pedunculated cirripedes had become extinct, and they have already suffered far more extinction than have sessile cirripedes, who would ever have imagined that the branchiae in this latter family had originally existed as organs for preventing the ova from being washed out of the sack?

But I digress. My point is that using the eye as evidence against evolution, as well as several other "problems" would appear to stem from a downright dishonest use of Darwin's text, taking the very difficulties Darwin explains away, but realising that others would, as Darwin clearly says, find them difficult, decided in their pompous morality that they knew best, that their goals were right, and if they had to be immoral, but would keep others from believing evolution by being so, then they would gladly do it for the supposed greater good.

And that logic makes me sick.

Carl “Olduvai George” Buell interviewed

December 3rd, 2005 by Reinder

Fun interview with paleontological illustrator Carl Buell aka Olduvai George, in which he discusses Australopitecine boozing, the blending of science, imagination and guesswork in creating illustrations based on incomplete fossil material ( Since you can't rely on photographs, you need more than a passing knowledge of comparative anatomy. And learn to draw feet.), keeping up to date (If the American Museum can change an entire T-rex mount to reflect new, more accurate ideas of posture, I can (and will) change something when new information presents itself. That's how science works. Actually, Ambulocetus is an example of new fossil finds changing images.), Intelligent Design (I grew up with Bible literalists. When I asked questions about things that didn't make sense to me I was told I needed more faith, that I thought too much.) and American politics (I remember a couple of elections back reading the Republican platform for the 1948 Dewey Presidential campaign. Much of it seemed to the left of where the Democrats now are. So I guess I'm mostly a 1948 Republican.).

He also mentions that his job is "a 3rd graders dream job. I'm still amazed that I can draw or paint an animal and occasionally somebody actually sends me a check for it.".

Come to think of it, he is a pretty lucky bastard. I grew up with ZdeƱek Burian's paleontological illustrations, and those made me want to be a paleontologist for several years as a kid. I would trade with Buell in an instant. Not that he's quite as good to my eyes as Burian, but he's pretty darned good, judging from the samples in the interview. He lacks Burian's grandeur and painterly touch, but he is more polished and probably more current as he is working with contemporary information.

Olduvai George has a blog to check out, too. (Via Dispatches From the Culture Wars)

Really, one Ig Nobel is enough…

June 20th, 2005 by Reinder

A few years ago, Groningen-based scientist Pek van Andel won an Ig Nobel prize for his paper Magnetic resonance imaging of male and female genitals during coitus and female sexual arousal. The criteria for the Ig Nobel allow for scientifically sound papers to qualify if the idea is crazy enough, which this was.
Of course, as enlightening as Dr. van Andel's study was (and it did correct some misconceptions about what exactly goes on with the male and female genitals during coitus), focusing on the genitals only will only get you so far. This study could be seen as sort of a follow-up: the researchers have used PET scans to figure out what happens in a woman's brain during orgasm. Turns out bits of it get switched off. This will be a comedy writers' goldmine, I'm sure.

Black-tailed Godwit redux

May 30th, 2005 by Reinder

I got a few people asking me what a Godwit was in response to the latest cycling report. Here's a site about them, in Dutch: Grutto.nl. It's got some information about the decline of their population, and a diary from a farmer trying to do the right thing and adapting his mowing schedule and the placement of his animals to the nesting birds.

The Dutch Secretary of Education should read this…

May 27th, 2005 by Reinder

... and then resign in shame.
Creationism: God's gift to the ignorant

Admissions of ignorance and mystification are vital to good science. It is therefore galling, to say the least, when enemies of science turn those constructive admissions around and abuse them for political advantage. Worse, it threatens the enterprise of science itself. This is exactly the effect that creationism or "intelligent design theory" (ID) is having, especially because its propagandists are slick, superficially plausible and, above all, well financed. ID, by the way, is not a new form of creationism. It simply is creationism disguised, for political reasons, under a new name.

The creationists' fondness for "gaps" in the fossil record is a metaphor for their love of gaps in knowledge generally. Gaps, by default, are filled by God. You don't know how the nerve impulse works? Good! You don't understand how memories are laid down in the brain? Excellent! Is photosynthesis a bafflingly complex process? Wonderful! Please don't go to work on the problem, just give up, and appeal to God. Dear scientist, don't work on your mysteries. Bring us your mysteries for we can use them. Don't squander precious ignorance by researching it away. Ignorance is God's gift to Kansas.

Maria van der Hoeven, you've been had. At least your stupidity has had the positive result that all the mainstream political factions in parliament except your own party, the Christian Bloody Stupid Democrats, are now looking to remove creationism from the curricula of schools that still teach it to their unlucky, indoctrinated students. Now for the love of God, hand in your notice and let someone who actually wants to promote education take over.

(Via Pete Ashton)

Technically, you’d only need one

May 2nd, 2005 by Reinder

OK, so this is being publicized all over the continuum, but I would like to point out that the pitch for a student-organised time traveler convention at MIT opens with a quote from Modern Tales' own, our very own Dorothy Gambrell (but from her non-MT comic Cat and Girl):

Technically, you would only need one time travel er convention.

And that shows comics' power to set the agenda for thinkers and scientists. Is that cool or what?

High Powered Corporate Hemichordate!

April 29th, 2005 by rahball

Reinder showed me a clipart of one of those Dynamic Businessmen on Barry's Clipart Server (www.barrysclipart.com), but I got bored of the people so I had a peek in the animals category instead.

And what did I find there? A clip art of a hemichordate!

What particularly impressed me was that despite the fact a very limited number of people in the world actually know what a hemichordate *is*, the artist had rendered it accurately enough for me to recognise it, even though its proboscis wasn't so phallic as to make me shout "penis worm!" (see image from my invertebrate zoology textbook, below...) They've even drawn the hepatic sacs!

I also like this swimming gastropod (not sure whether it's a nudibranch..) But it's clearly been engaging in kleptoplasty, the practice of nicking useful things out of other organisms' tissues and sticking them in your own. It's full of chlorophyll from the green algae it's been eating. Now it can photosynthesize for itself!

Is this intended as a hint to ambitious businessmen?

Bug Dreams

April 25th, 2005 by Reinder

Via Boing Boing, Bug Dreams has some very good artistic photography of insects. Photographer Rick Lieder makes those bugs look like heroic, rugged individualists.

Evolution and Gilbert and Sullivan

February 8th, 2005 by Adam Cuerden

(To the tune of By the Mystic Regulation (here sequenced by Clifton Coles) from Gilbert and Sullivan's The Grand Duke

At the start of life's creation
'Twas the chemical relation
That allowed the duplication
Of the precursors of life
That began this vale of strife
(That began this vale of strife, this vale of strife)

And those that copied faster
For the others caused disaster
For the resources they'd master
And the others would lose out,
Then new mutants start their bout
(Then new mutants, then new mutants start their bout)

(more...)